CDS

Accession Number TCMCG058C25234
gbkey CDS
Protein Id KAF7147071.1
Location join(37054597..37054737,37055597..37055692,37056362..37056436,37056557..37056661,37056796..37056906,37057595..37057754,37058804..37058889,37060279..37060401,37060500..37060727,37061103..37061192,37062299..37062460,37062898..37063014,37063124..37063330,37064201..37064302,37064429..37064572,37065475..37065605,37065694..37065813,37066059..37066182,37066311..37066565,37067841..37067959,37068089..37068239,37068389..37068501,37068584..37068665,37068748..37068834,37068938..37069015,37069840..37070046,37071587..37071679,37071754..37071867,37072001..37072171,37072285..37072340,37072416..37072488,37072594..37072784,37072880..37073006,37073102..37073197,37073919..37074083,37074288..37074458,37074531..37074668,37077283..37077426,37077703..37077825,37077939..37078034,37078161..37078298,37078417..37078517,37080857..37080976,37081048..37081180,37081974..37082057)
Organism Rhododendron simsii
locus_tag RHSIM_Rhsim03G0247900

Protein

Length 1915aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA588298, BioSample:SAMN13241185
db_source WJXA01000003.1
Definition hypothetical protein RHSIM_Rhsim03G0247900 [Rhododendron simsii]
Locus_tag RHSIM_Rhsim03G0247900

EGGNOG-MAPPER Annotation

COG_category S
Description Nuclear pore complex protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044611        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTCTCCGAAGCAACTCCTCTCCACAATCGAGTCCTCCCTCCTAGGCCCAACCCCTCCGACGCCTTCGCAAAGGATCGAGCTCATGCACTCCATTCGCCGCTCTCTCCCCTCCCTCCAGTCCCTCCTATTTTACCCGCCTCCAAAACCATCTGACCGAGCTGAAGTCCAGTCGAGAGAAGTCAGGCTTCCGGATTCTTCCCCGATTTCACTTGATGATCAAGATGTCCAAATTGCTTTGAAATTAAGTGATGATCTCAACCTTAATGAAATAGACTGCGCGCGTTTGCTTGTCTCTGCCAATCAAGAGTGGGGCTTATTGGGACGAGATCCAGTAGAAATTTTGCGCCTTGCAGCAGGGCTTTGGTATACAGAGAGAAGAGACCTCATAACAGCACTTTACACATTATTAAGGGCTGTTGTGCTTGACCAGGGACTTGAAGTTGATCTTGTGGCTGACATTCAGAAATATCTGGAAGATCTTATTAGTTCTGGGCTTCGACAAAGATTAATTTCTCTCATAAAGGAACTGAATCGAGAAGAACCAGCTGGTTTGGGAGGGCCTCACTCAGAGCGCTATGTTCTTGATTCAAGAGGCGCACTTGTGGAGCGTCAAGCAGTCGTTTGTAGGGAAAGACTGATCCTTGGCCATTGCCTTGTACTTTCTATTTTGGTCGTGAGGGCAAGCCCAAAAGATGTGAAGGACATTTTCTCCGCTTTGAAAGATAGCTCTGCTGAACTTAATGGTAGCAATGACACCCTAAAACATCAGATTGCATATAGCCTTCTCTTTTCTCTTGTTATCGCCGTCATATCTGATGCATTGAGCACAGCACCTGATAAAATGTCTGTCTTATCTTGTGATGCATCTTTTAGGCGTGAATTTCAGGAAACAGTAATTGCTTCGGGAAGTGATCTAATTGCTGAGGGCTTTGTAGATTGTGTACGACTTGCATGGGCTACACATTTGATGTTAATACTAGATGGAAATGATACAAGGGAGAATGTACCAAGTGCTTCACCTAGTGACATTGGATATATTTCCTCTTGCTTGGAAACAATTTTCTCAAACAACGTGTTCCAGTTTTTCCTGGTTAAGATTCTTCAAACTGCCGCTTATCAGAATGATGATGAGGATATGACCTATATGTACAATGCGTATCTGCACAAGCTTATTACATGCTTTCTTTCTCATCCACATGCTAGAGAAAAGGTTAAAGAAACAAAAGAAAAGGCTATGACTGCACTTAGCCCCTACCGCATTGCTGGGTCACTTGATTATATGCATGACAGTAGTGCGCATTCTCAACAAGCTACTGAAACAGCCCCTCAACCCTTTGTGTCTCTTTTGGAGTTTGTGAGTGAAATTTATCAGAAGGAACCAGAGCTGCTTTCTGGCAATGATGTCTTGTGGACATTTGTGAACTTCGCTGGAGAGGACCATACTAACTTTCAAACTCTGGTGGCCTTCTTGAAAATGCTGAGTACCTTGGCTTCTAGTCAAGAGGGAGCTTCAAAGGTTTTCGAATTACTTCAGGGTAAAACATTCCGCTCTATTGGGTGGAGTACTCTGTTTGATTGTTTATCAATCTATGAAGAGAAGTTCAAACAGTCCCTTCAAAGTCCTGGGGCAATGTTACCGGAATTTCAGGAGGGGGATGCAAAAACACTTGTTGCATATTTGAATGTTCTGCAGAAGGTAGTGGAAAATGGGAATCCCACTGAAACAAGGAACTGGTTTCCTGAAATTGAGCCATTATTCAAGCTCCTCAGTTATGAAAATGTGCCTCCTTATTTGAAGGGTGCTTTGCGTAATGCTATAGCTACTTTTGTTCGAGTTTCTCCAACATTAAAGGATACTATTTGGAGATACCTTGAGCAATATGATCTTCCAGTTGTTGTGGGGCCTCATCCCGGGAGCAGCACACCATCCATGACAGCACAGGTGTATGATATGAGGTTCGAGTTAAATGAAATAGAAGCAAGAAGAGAACAATACCCTTCAACAATATCTTTCCTCAACTTGTTAAATGTGCTTATTTCCGAAGAAAGGGATGTCAGTGATAGAGGGCGTAGATTCATTGGAATTTTTAGGTTCATATACGATCATGTGTTTGGTCCCTTCCCCCAAAGAGCCTATGCAGACCCTTGTGAGAAATGGCAGTTAGTTATTGCTTGTCTCCAGCATTTTCGAATGATACTAAGCTTGTATGACATTGTGGATGAGGATGTTGACAATATTATTGACCAATCACAACCTTCAGCACTGGCCGAATCTGCTTCATTTCAAATGCAGCTGCCTATCATAGAGTTATTGAAAGTAACAATATTTGATGTTAAATTTGTACAGGATTTTATGAGTGGGAAAATCGTCTTCCGAAATGTCATGGGTATTCTTTTGCCGGGTGTTAATTCCATCATTTCTGAACGCACTAATCAAATTTATGGTCAACTACTAGAAAAGGCTGTAATGCTTTCTTTGGAGATCATAATCTTGGTCTTGGAGAAGGACCAAACCGTATCTGATTTCTGGCGCCCTCTCTACCAGGTATCTAATGTTTCTGGGTTTCAAGTGCCTTTGGATGTCATCCTCTCCCAAGATCATAATCAAATTGTGGCTCTTTTGGAGTATGTCAGATATGATTCTCACCCCCAAATTCAGCAATGCTCTATCAAAATTATGAGCATCCTAAGTTCTCGTATGGTTGGGCTTGCACAGTTGCTGTTAAAATCAAATGCTGCAAGCTCTTTGATCGAGGATTATGCTGCCTGCCTGGAGCTGCGATCAGAAGAAAGCCAGATTATAGAGAACAGTAGTGAGGATCCCGGCGTTCTCATATTGCAGCTTCTTATTGACAATATTAATCGCCCAGCTCCAAATATTGCACATTTATTGCTCAAGTTTGATCTTGACACACCTGTAGAAAGGACAGTGCTACAGCCTAAGTTTCATTACAGTTGCTTGAAGGTTATGCTCGATATTCTTGAAAAGCTTTCAAAGCCTGATATCAATGCCTTGCTACATGAATTTGGTTTTCAGCTTCTTTTTGAGTTATGCTCGGATCCACTGACAGGTGGCCCTACCATGGATCTTTTAAGTAGTAAAAAGTACCAATGCTTTGTAAAGCACCTGGAGACAATTGGAGTTGCTCCGCTTCCAAAAAGAAATAGCACTCAAGCGCTTCGCATCAGCTCCCTCCATCAGAGAGCATGGCTGTTGAAGCTTTTGTCTATCGAATTACACACCGCTGATATGGCTAATTCCGGCCATCGAGAAGCATGCCAAAGTATTCTTGCTCATCTTTTTGGGCAGGATGTCATCGAATATGGCACAGATTCTAATATACCTCAATCATTTCTCCTTCAGAATAGTGCTGATATTGTGGGAACCGGAACAATCAGTAAGAGTAAGGTGCTGGAAATGCTTGAAGTTGTTCAGTTCAGGTCTCCTGATACCAGTATGAAGTATTCTCAGGCTGTTTCTAATATGAAATACGGGTTCCTGGCTGAGGATATACTCAGGAATCCAGCAACTTCTGGAAAGGGAGGTATTTATTACTTTTCAGAGCGGGGTGATCGTTTGGTTGATCTTGCTGCATTCCGCGATAAGCTTTGGCAGAAATGCAACACCATTAATCCCCAACTGAGCTCTTTTGGCAGTGAAGTCGAGCTCAATGAGGTAAGTGATACTATTCAGCAGTTATTACGATGGGGATGGAAGTATAATAAGAACCTTGAAGAACAAGCTGCCCAGCTTCATATGTTAACTGGCTGGTCTCAGATTGTTGAGGTCTCCGCATCCAGAAGAATATCATCTCTTGAAAATCGATCTGAAATTTTATTTCAGTTGCTTGATGCCTCTTTGTGTGCTTCTGCTTCTCCAGACTGTTCACTGAAGATGGCGATAATACTGACACAGGTTGCTCTTACATGCATGGCCAAGCTGCGTGATGAAAGATTTTTATGCCCTGGAAGTTTAAATGCTGACACTGTGACATGTCTCGATATAATCATGGCTAAACACTTGTCAAATGGAGCTTGTAACTCTATCCTGTTCAAGCTCATCATGGCAATCCTTAGAAATGAATCATCGGAAGCATTGAGAAGACGCCAATATGCCTTGCTTCTTAGCTACTTCCAGTACTGTAGACATATGCTTGATCCGGATGTTCCGATGTCGGTTCTGCAGTTCTTGTTGCTCGATGAGCAAAACGCTGAGGATTTGGACCTCCAGAAGATTGACAAAGAGCAGGCAGAATTAGCTCGGGCCAATTTTTCAATTGTTAAGAAAGATGCTCAAGCAATCCTAGATTTGGTGGGTGCAACGTCTTATGTTATGAAGGATGCTACTCAAGGCAGTGAATCTGGAAAGACAATATCACTCTATGTCCTGGATGCATTGATTTGTATTGATTATGAGAAGTTTTTCTTAAGCCAACTTCAAAGTAGAGGTTTCCTTAGGTCTTGCTTTATGAGCATCAGCAATCTTTCTTATCAGGATGGTGGGCGTTCATTGGATTCTTTGCAGCGAGTTTGTACTCTGGAGGCAGAACTCTCTCTATTGTTGAGAATATGTTACAGATATGGAAAATCAGGGGCCCAGGTTCTATTTTCTATGGGTGCTTTGGAACATATCGCATCATGCAGGGCAGTCAATATGCAGATTAAGGGAAGTCTAAGGCGGGTTGATGCTAAGTTTGGAAGAGATTTATCTGTGGATGTTGATAAACGACGAATGATCATTGCTCCAATTTTGAGATTAGTTTTTTCTCTCACTTCATTGATTGATGCATCAGATTTCTTTGAGGTGAAGAATAAAATTGTTCGTGAAGTGATGGATTTTGTCAAACGCCATCGATTTATCTTTGATCAAGTTCTTCGGGAAGATGTTTCTGAAGCTGATGAATTGACGACGGAGCAGTTAAATCTTGTTGTTGGTATACTTAGCAAGGTTTGGCCATATGATGAGAGTGGCGAGTATGGTTTTGTTCAAGGGCTCTTCGGGATGATGTGTGCTCTTTTCTCACATGATTCAGAATCCCTTTCTTTTAACAAATCCGTACGAGCTTTAGAGAATCAGCGGAAGTCAGAGTTGAACACTTTTGGTCTCTGTGTTAGCCTAAGCTCTTATCTCTATTCCCTGGTCACAAAGAACACACTAAGACTACAGGTTTCAGATAGTCTCACAGATTATTGTGCATCTGCTGGACAGCAGCAGCCCACATTGGCTCTACTCGGTTCTTTTCTTAGTTCTGTGACAACTGTTCTCGAAAGAGCTGCTGAGGAAAAATCTTTACTGCTTAACAAGATTCAAGACATAAATGACCTATCAAGACAGGAGGTGGATGATATTATCAGTATGTGCATCCGACAAGATCACATTGCTTCATCAGACAATATACAGAGAAGGAGATATATCGCAATGGTGGAAATGTGCCGGATCGCTGGAAACAGGGATCAGCTTATCAATTTGCTACTTGTGCTTGCAGAGAATGTGGCGAACATTATCCTTGTCCATTTTCAGGATGGTTCTTATCTACCCGACCCAGTTGCAGCAATGAAGACGATAACGTACAGTTCCAAGCCTGACACTGGGGAGGATATGCCTTCACTATGTGAAAAGTTAATTCCAACTTTAGAAAGACTGGAATCGCTAAGTGAGGACAAAACGGGTCATAACCTTAAGGTTTTCCAAAGATTAGTATACTCACTCAAGGAAATTGCAATTCAAAACTTAAGTTTATGA
Protein:  
MVSPKQLLSTIESSLLGPTPPTPSQRIELMHSIRRSLPSLQSLLFYPPPKPSDRAEVQSREVRLPDSSPISLDDQDVQIALKLSDDLNLNEIDCARLLVSANQEWGLLGRDPVEILRLAAGLWYTERRDLITALYTLLRAVVLDQGLEVDLVADIQKYLEDLISSGLRQRLISLIKELNREEPAGLGGPHSERYVLDSRGALVERQAVVCRERLILGHCLVLSILVVRASPKDVKDIFSALKDSSAELNGSNDTLKHQIAYSLLFSLVIAVISDALSTAPDKMSVLSCDASFRREFQETVIASGSDLIAEGFVDCVRLAWATHLMLILDGNDTRENVPSASPSDIGYISSCLETIFSNNVFQFFLVKILQTAAYQNDDEDMTYMYNAYLHKLITCFLSHPHAREKVKETKEKAMTALSPYRIAGSLDYMHDSSAHSQQATETAPQPFVSLLEFVSEIYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVFELLQGKTFRSIGWSTLFDCLSIYEEKFKQSLQSPGAMLPEFQEGDAKTLVAYLNVLQKVVENGNPTETRNWFPEIEPLFKLLSYENVPPYLKGALRNAIATFVRVSPTLKDTIWRYLEQYDLPVVVGPHPGSSTPSMTAQVYDMRFELNEIEARREQYPSTISFLNLLNVLISEERDVSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVIACLQHFRMILSLYDIVDEDVDNIIDQSQPSALAESASFQMQLPIIELLKVTIFDVKFVQDFMSGKIVFRNVMGILLPGVNSIISERTNQIYGQLLEKAVMLSLEIIILVLEKDQTVSDFWRPLYQVSNVSGFQVPLDVILSQDHNQIVALLEYVRYDSHPQIQQCSIKIMSILSSRMVGLAQLLLKSNAASSLIEDYAACLELRSEESQIIENSSEDPGVLILQLLIDNINRPAPNIAHLLLKFDLDTPVERTVLQPKFHYSCLKVMLDILEKLSKPDINALLHEFGFQLLFELCSDPLTGGPTMDLLSSKKYQCFVKHLETIGVAPLPKRNSTQALRISSLHQRAWLLKLLSIELHTADMANSGHREACQSILAHLFGQDVIEYGTDSNIPQSFLLQNSADIVGTGTISKSKVLEMLEVVQFRSPDTSMKYSQAVSNMKYGFLAEDILRNPATSGKGGIYYFSERGDRLVDLAAFRDKLWQKCNTINPQLSSFGSEVELNEVSDTIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQIVEVSASRRISSLENRSEILFQLLDASLCASASPDCSLKMAIILTQVALTCMAKLRDERFLCPGSLNADTVTCLDIIMAKHLSNGACNSILFKLIMAILRNESSEALRRRQYALLLSYFQYCRHMLDPDVPMSVLQFLLLDEQNAEDLDLQKIDKEQAELARANFSIVKKDAQAILDLVGATSYVMKDATQGSESGKTISLYVLDALICIDYEKFFLSQLQSRGFLRSCFMSISNLSYQDGGRSLDSLQRVCTLEAELSLLLRICYRYGKSGAQVLFSMGALEHIASCRAVNMQIKGSLRRVDAKFGRDLSVDVDKRRMIIAPILRLVFSLTSLIDASDFFEVKNKIVREVMDFVKRHRFIFDQVLREDVSEADELTTEQLNLVVGILSKVWPYDESGEYGFVQGLFGMMCALFSHDSESLSFNKSVRALENQRKSELNTFGLCVSLSSYLYSLVTKNTLRLQVSDSLTDYCASAGQQQPTLALLGSFLSSVTTVLERAAEEKSLLLNKIQDINDLSRQEVDDIISMCIRQDHIASSDNIQRRRYIAMVEMCRIAGNRDQLINLLLVLAENVANIILVHFQDGSYLPDPVAAMKTITYSSKPDTGEDMPSLCEKLIPTLERLESLSEDKTGHNLKVFQRLVYSLKEIAIQNLSL